6BDI
Crystal structure of human CYP3A4 bound to an inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 103 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS3 X 1M |
Wavelength(s) | 0.98 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 77.610, 102.430, 127.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.215 - 2.570 |
R-factor | 0.1946 |
Rwork | 0.192 |
R-free | 0.24470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vcc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.202 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.920 | 2.710 |
High resolution limit [Å] | 2.570 | 2.570 |
Rmerge | 0.060 | 1.817 |
Rpim | 0.030 | 0.897 |
Number of reflections | 16151 | 2312 |
<I/σ(I)> | 9.4 | 0.9 |
Completeness [%] | 97.8 | 97.6 |
Redundancy | 4.8 | 4.8 |
CC(1/2) | 0.999 | 0.315 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.8 | 293 | PEG 3350, malonate |