Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6B7E

Crystal structure of E.coli Phosphopantetheine Adenylyltransferase (PPAT/CoaD) in complex with (R)-4-(5-(difluoromethyl)-1H-imidazol-1-yl)-3,3-dimethylisochroman-1-one

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyCCD
Collection date2017-03-01
DetectorBruker Platinum 135
Wavelength(s)1.5418
Spacegroup nameI 2 3
Unit cell lengths135.480, 135.480, 135.480
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.294 - 2.104
R-factor0.1732
Rwork0.171
R-free0.20620
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jbn
RMSD bond length0.009
RMSD bond angle0.988
Data reduction softwarexia2 (1.6)
Data scaling softwareAimless (0.5.31)
Phasing softwarePHENIX (1.12_2829)
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.21036.2102.160
High resolution limit [Å]2.1009.4102.100
Rmerge0.1110.0240.865
Rmeas0.1250.0270.984
Rpim0.0580.0120.457
Total number of observations106196
Number of reflections239752741757
<I/σ(I)>10.6
Completeness [%]99.492.799.2
Redundancy4.44.24.3
CC(1/2)0.9970.9990.558
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2911.8 M AMMONIUM SULFATE, 0.25 M POTASSIUM THIOCYANATE, 0.2 M POTASSIUM BROMIDE

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon