6B2G
P38A mutant of HIV-1 capsid protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-10 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.033200 |
Spacegroup name | P 6 |
Unit cell lengths | 92.139, 92.139, 57.481 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.640 - 2.407 |
R-factor | 0.2391 |
Rwork | 0.238 |
R-free | 0.25780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xfx |
RMSD bond length | 0.002 |
RMSD bond angle | 0.447 |
Data reduction software | Aimless (0.5.31) |
Data scaling software | Aimless (0.5.31) |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX (1.11.1-2575_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.640 | 46.640 | 2.500 |
High resolution limit [Å] | 2.407 | 9.000 | 2.410 |
Rmerge | 0.065 | 0.050 | 1.038 |
Rmeas | 0.068 | 0.053 | 1.095 |
Rpim | 0.022 | 0.018 | 0.344 |
Number of reflections | 10898 | 228 | 1116 |
<I/σ(I)> | 19.6 | ||
Completeness [%] | 99.6 | 99.6 | 96.7 |
Redundancy | 10.1 | 9.2 | 9.6 |
CC(1/2) | 0.998 | 0.997 | 0.716 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | PEG3350, NaI, MIB, Glycerol |