6B14
Crystal structure of Spinach RNA aptamer in complex with Fab BL3-6S97N
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-11 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97921 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 146.773, 79.993, 92.892 |
Unit cell angles | 90.00, 111.76, 90.00 |
Refinement procedure
Resolution | 49.540 - 1.640 |
R-factor | 0.2124 |
Rwork | 0.212 |
R-free | 0.22680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kze |
RMSD bond length | 0.005 |
RMSD bond angle | 0.863 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.540 | 1.700 |
High resolution limit [Å] | 1.640 | 1.640 |
Rmerge | 0.043 | |
Number of reflections | 119527 | |
<I/σ(I)> | 12.6 | 0.7 |
Completeness [%] | 97.9 | 97.09 |
Redundancy | 3.4 | |
CC(1/2) | 0.996 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 296 | 0.1 M Succinic acid (pH 7.0), 12% Polyethylene glycol 3,350, room temperature. |