6AXS
Structure of the V11I/T58A/P122A mutant of the HIV-1 capsid protein
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2016-12-19 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 1.000032 |
| Spacegroup name | P 6 |
| Unit cell lengths | 92.475, 92.475, 57.675 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 36.076 - 2.402 |
| R-factor | 0.2306 |
| Rwork | 0.228 |
| R-free | 0.26590 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | pdbid 4XFX |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.633 |
| Data reduction software | Aimless (0.5.32) |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | PHASER (2.7.17) |
| Refinement software | PHENIX (1.11.1-2575_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 36.076 | 57.680 | 2.490 |
| High resolution limit [Å] | 2.400 | 8.990 | 2.400 |
| Rmerge | 0.078 | 0.040 | 0.781 |
| Rmeas | 0.082 | 0.042 | 0.829 |
| Rpim | 0.025 | 0.014 | 0.270 |
| Total number of observations | 114114 | ||
| Number of reflections | 10917 | 219 | 1140 |
| <I/σ(I)> | 20.7 | ||
| Completeness [%] | 98.2 | 94.5 | 98.1 |
| Redundancy | 10.5 | 9.9 | 8.8 |
| CC(1/2) | 0.998 | 0.997 | 0.815 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | PEG3350, NaI, Sodium cacodylate, Glycerol |






