6APK
Trans-acting transferase from Disorazole synthase solved by serial femtosecond XFEL crystallography
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | FREE ELECTRON LASER |
Source details | SLAC LCLS BEAMLINE XPP |
Synchrotron site | SLAC LCLS |
Beamline | XPP |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2016-12-08 |
Detector | RAYONIX MX170-HS |
Wavelength(s) | 1.3013 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.214, 54.642, 124.152 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.499 - 2.500 |
R-factor | 0.2298 |
Rwork | 0.225 |
R-free | 0.26940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rgi |
RMSD bond length | 0.003 |
RMSD bond angle | 0.636 |
Data reduction software | cctbx.xfel |
Data scaling software | cctbx.prime |
Phasing software | PHASER (2.7.16) |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.500 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 10781 | |
<I/σ(I)> | 4.1 | 1.9 |
Completeness [%] | 98.8 | 89.9 |
Redundancy | 14.2 | 4.7 |
CC(1/2) | 0.920 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 298 | 1.6M Ammonium Sulphate, 100mM sodium citrate (pH 4.5) |