6AE6
Crystals structure of Classical swine fever virus NS5B (residues 1-672, Y471A mutant, form 2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 115.501, 115.501, 293.335 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.319 - 3.856 |
R-factor | 0.2111 |
Rwork | 0.209 |
R-free | 0.24720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cjq |
RMSD bond length | 0.003 |
RMSD bond angle | 0.682 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.990 |
High resolution limit [Å] | 3.850 | 8.280 | 3.850 |
Rmerge | 0.146 | 0.058 | 0.523 |
Rmeas | 0.157 | 0.063 | 0.558 |
Rpim | 0.055 | 0.023 | 0.192 |
Number of reflections | 22116 | 2351 | 2161 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 99.8 | 98.5 | 100 |
Redundancy | 7.9 | 7.2 | 8.3 |
CC(1/2) | 0.998 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 289 | SOKALAN CP42 |