6A07
Salmonella Typhi YfdX in the F222 space group at 1.5 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2016-04-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | F 2 2 2 |
Unit cell lengths | 88.798, 92.207, 95.364 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.560 - 1.501 |
R-factor | 0.1841 |
Rwork | 0.182 |
R-free | 0.21520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6a02 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.720 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rpim | 0.035 | 0.131 |
Number of reflections | 31146 | 1542 |
<I/σ(I)> | 38.3 | |
Completeness [%] | 99.4 | |
Redundancy | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 293 | 0.1 M sodium acetate (pH 4.6), 2.5 M sodium chloride, 12% PEG1500, 1.5% 2-methyl-2,4-pentanediol |