5NJ5
E. coli Microcin-processing metalloprotease TldD/E with phosphate bound
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-01 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9200 |
Spacegroup name | P 1 21 1 |
格子定数 [Å] | 64.770, 173.990, 83.520 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 75.290 - 1.900 |
R因子 | 0.1406 |
Rwork | 0.139 |
R-free | 0.17810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tv9 |
結合長の平均二乗偏差(RMSD) [Å] | 0.010 |
結合角の平均二乗偏差(RMSD) [度] | 1.376 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.12) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 75.290 | 75.290 | 1.950 |
分解能 [Å] (高) | 1.900 | 8.500 | 1.900 |
Rmerge_l_obs | 0.087 | 0.027 | 0.551 |
Rmeas | 0.100 | 0.031 | 0.683 |
Rpim | 0.047 | 0.014 | 0.392 |
独立反射数 | 136171 | ||
<I/σ(I)> | 12.3 | ||
完全性 [%] | 94.1 | 99.1 | 69.1 |
冗長性 | 4.2 | 4.6 | 3 |
CC(1/2) | 0.997 | 0.999 | 0.565 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | NULL |