Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5BUQ

Unliganded Form of O-succinylbenzoate Coenzyme A Synthetase (MenE) from Bacillus Subtilis, Solved at 1.98 Angstroms

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2014-04-03
DetectorADSC QUANTUM 315r
Wavelength(s)0.973
Spacegroup nameP 1 21 1
Unit cell lengths82.780, 76.910, 93.870
Unit cell angles90.00, 114.93, 90.00
Refinement procedure
Resolution33.270 - 1.980
R-factor0.1624
Rwork0.161
R-free0.19970
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3IPL(N-domain of S. aureus MenE) chainA
RMSD bond length0.007
RMSD bond angle0.999
Data reduction softwareiMOSFLM (Version 6.4.0)
Phasing softwarePHENIX (1.8.4_1496)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.2702.051
High resolution limit [Å]1.9801.980
Rmerge0.0480.204
Number of reflections73620
<I/σ(I)>22.069.05
Completeness [%]98.899.15
Redundancy1.91.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.152938.1% (w/v) PEG8000, 0.09M cacodylate/HCl pH 6.15, 0.144M calcium acetate, 12.6% glycerol with additive agent of 0.049M sodium phosphate monobasic and 0.091M Potassium phosphate dibasic

218853

数据于2024-04-24公开中

PDB statisticsPDBj update infoContact PDBjnumon