5ZZN
Crystal structure of photosystem II from an SQDG-deficient mutant of Thermosynechococcus elongatus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 122.250, 228.430, 287.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.990 - 2.100 |
R-factor | 0.1562 |
Rwork | 0.154 |
R-free | 0.19660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wu2 |
RMSD bond length | 0.021 |
RMSD bond angle | 2.582 |
Data reduction software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.990 | 2.220 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.087 | 0.886 |
Number of reflections | 459862 | 73153 |
<I/σ(I)> | 13.7 | 2.1 |
Completeness [%] | 99.5 | 98.5 |
Redundancy | 6.8 | 6.7 |
CC(1/2) | 0.998 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6 | 285 | 5% PEG 1450, 20MM NACL, 10MM CACL2, 40MM MGSO4, 20MM MES BUFFER, PH 6.0, MICRO-BATCH METHOD UNDER OIL, TEMPERATURE 285K |