5ZW3
Crystal Structure of TrmR from B. subtilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-19 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 76.874, 116.738, 43.437 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.270 |
R-factor | 0.2156 |
Rwork | 0.213 |
R-free | 0.26610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gpy |
RMSD bond length | 0.001 |
RMSD bond angle | 0.415 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.310 |
High resolution limit [Å] | 2.270 | 6.160 | 2.270 |
Rmerge | 0.091 | 0.060 | 0.413 |
Rmeas | 0.100 | 0.067 | 0.462 |
Rpim | 0.040 | 0.028 | 0.202 |
Total number of observations | 113363 | ||
Number of reflections | 18494 | 949 | 878 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 99.2 | 90.7 | 97.6 |
Redundancy | 6.1 | 5.5 | 5.1 |
CC(1/2) | 0.997 | 0.976 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 1.1 M Ammonium tartrate dibasic (pH 7.0) |