5ZVD
The crystal structure of NSun6 from Pyrococcus horikoshii
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-07-13 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9777 |
| Spacegroup name | P 1 |
| Unit cell lengths | 52.195, 52.605, 83.968 |
| Unit cell angles | 81.78, 81.78, 67.93 |
Refinement procedure
| Resolution | 48.140 - 2.594 |
| R-factor | 0.1806 |
| Rwork | 0.178 |
| R-free | 0.23630 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5wwq |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.889 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.640 |
| High resolution limit [Å] | 2.594 | 7.050 | 2.600 |
| Rmerge | 0.115 | 0.063 | 0.392 |
| Rmeas | 0.124 | 0.068 | 0.430 |
| Rpim | 0.046 | 0.025 | 0.172 |
| Number of reflections | 23084 | 1222 | 883 |
| <I/σ(I)> | 5.7 | ||
| Completeness [%] | 91.4 | 96.4 | 67 |
| Redundancy | 6.7 | 7.1 | 5.4 |
| CC(1/2) | 0.994 | 0.879 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 289 | magnesium acetate tetrahydrate,Sodium sodium cacodylate trihydrate , polyethylene glycol 8,000 |






