5ZSR
NifS from Hydrogenimonas thermophila, soaked with L-cysteine for 8 min
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-12-24 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1 |
Spacegroup name | P 65 |
Unit cell lengths | 135.900, 135.900, 98.600 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.472 - 2.610 |
R-factor | 0.1958 |
Rwork | 0.194 |
R-free | 0.24080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1eg5 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.472 | 45.472 | 2.710 |
High resolution limit [Å] | 2.610 | 10.000 | 2.610 |
Rmerge | 0.132 | 0.027 | 0.982 |
Rmeas | 0.145 | 0.030 | 1.078 |
Total number of observations | 362267 | ||
Number of reflections | 31566 | 1081 | 6537 |
<I/σ(I)> | 13.73 | 55.03 | 2.17 |
Completeness [%] | 99.5 | 99.1 | 99.2 |
Redundancy | 5.88 | 5.644 | 5.851 |
CC(1/2) | 0.996 | 0.999 | 0.723 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2M Magnesium chloride, 0.1M Tris-HCl, 20% (w/v) PEG 8000, 5mM L-cysteine |