5ZQL
crystal structure of human katanin AAA ATPase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-14 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 |
Unit cell lengths | 97.810, 97.810, 72.706 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.481 - 3.007 |
R-factor | 0.2752 |
Rwork | 0.275 |
R-free | 0.28520 |
Structure solution method | SAD |
Starting model (for MR) | 3b9p |
RMSD bond length | 0.005 |
RMSD bond angle | 1.171 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.075 | 0.389 |
Rmeas | 0.034 | 0.294 |
Rpim | 0.083 | 0.491 |
Number of reflections | 13831 | 13831 |
<I/σ(I)> | 10.8 | 4 |
Completeness [%] | 94.5 | 85.4 |
Redundancy | 4.6 | 2.1 |
CC(1/2) | 0.055 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.3 M Lithium citrate acetate pH6.0 20% (v/v) PEG 3,350 |