5ZQ3
PDE-Ubiquitin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 193 |
Detector technology | PIXEL |
Collection date | 2018-03-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 96.628, 55.888, 99.745 |
Unit cell angles | 90.00, 110.50, 90.00 |
Refinement procedure
Resolution | 49.109 - 2.182 |
R-factor | 0.1891 |
Rwork | 0.188 |
R-free | 0.21350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zq5 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.910 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.220 |
High resolution limit [Å] | 2.180 | 2.180 |
Rmerge | 0.084 | |
Rmeas | 0.092 | 0.984 |
Rpim | 0.035 | 0.396 |
Number of reflections | 48429 | |
<I/σ(I)> | 20 | |
Completeness [%] | 98.9 | |
Redundancy | 6.7 | |
CC(1/2) | 0.996 | 0.704 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 10000, Bicine |