5ZQ3
PDE-Ubiquitin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 193 |
| Detector technology | PIXEL |
| Collection date | 2018-03-15 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9785 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 96.628, 55.888, 99.745 |
| Unit cell angles | 90.00, 110.50, 90.00 |
Refinement procedure
| Resolution | 49.109 - 2.182 |
| R-factor | 0.1891 |
| Rwork | 0.188 |
| R-free | 0.21350 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5zq5 |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.910 |
| Data scaling software | HKL-3000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.220 |
| High resolution limit [Å] | 2.180 | 2.180 |
| Rmerge | 0.084 | |
| Rmeas | 0.092 | 0.984 |
| Rpim | 0.035 | 0.396 |
| Number of reflections | 48429 | |
| <I/σ(I)> | 20 | |
| Completeness [%] | 98.9 | |
| Redundancy | 6.7 | |
| CC(1/2) | 0.996 | 0.704 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEG 10000, Bicine |






