5ZOC
Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (C2 space group).
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2017-09-01 |
| Detector | RIGAKU RAXIS IV |
| Wavelength(s) | 1.5417 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 58.714, 77.873, 54.074 |
| Unit cell angles | 90.00, 112.61, 90.00 |
Refinement procedure
| Resolution | 49.920 - 1.980 |
| R-factor | 0.1999 |
| Rwork | 0.198 |
| R-free | 0.23030 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4mb6 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.179 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.010 |
| High resolution limit [Å] | 1.980 | 5.371 | 1.980 |
| Rmerge | 0.034 | 0.030 | 0.149 |
| Rmeas | 0.039 | 0.034 | 0.173 |
| Rpim | 0.017 | 0.015 | 0.085 |
| Number of reflections | 15046 | 795 | 512 |
| <I/σ(I)> | 42.5 | ||
| Completeness [%] | 95.9 | 98.4 | 63.9 |
| Redundancy | 5 | 4.7 | 3.4 |
| CC(1/2) | 0.997 | 0.992 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 25% PEG3350, 0.1M Tris-Hcl pH 8.5, 0.2M Sodium Acetate with 5mM adenine and 5% ethylene glycol |






