Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZNM

Colicin D Central Domain and C-terminal tRNase domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-24
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths116.352, 146.115, 45.763
Unit cell angles90.00, 102.49, 90.00
Refinement procedure
Resolution44.842 - 1.850
R-factor0.1737
Rwork0.172
R-free0.21230
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle0.973
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.880
High resolution limit [Å]1.8501.850
Number of reflections63995
<I/σ(I)>14.11.8
Completeness [%]96.493.9
Redundancy5.13.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52940.1 M HEPES sodium pH 7.5, 2.5% v/v Polyethylene glycol 400, 2.2 M ammonium sulfate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon