5ZLF
CRYSTAL STRUCTURE OF OCTAPRENYL PYROPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI WITH ligand BPH-629
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-26 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 149.344, 46.645, 215.741 |
Unit cell angles | 90.00, 101.08, 90.00 |
Refinement procedure
Resolution | 24.871 - 2.845 |
R-factor | 0.2435 |
Rwork | 0.241 |
R-free | 0.29860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3wjk |
RMSD bond length | 0.009 |
RMSD bond angle | 1.592 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.950 |
High resolution limit [Å] | 2.850 | 6.110 | 2.850 |
Rmerge | 0.072 | 0.037 | 0.582 |
Rmeas | 0.082 | 0.043 | 0.666 |
Rpim | 0.039 | 0.021 | 0.319 |
Total number of observations | 150953 | ||
Number of reflections | 34599 | 3608 | 3427 |
<I/σ(I)> | 11.6 | ||
Completeness [%] | 99.9 | 99.1 | 100 |
Redundancy | 4.4 | 4.1 | 4.4 |
CC(1/2) | 0.998 | 0.802 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.3M MAGNESIUM CHLORIDE HEXAHYDRATE, 0.1M TRIS-HCL, 24%(W/V) POLYETHYLENE GLYCOL 3350 |