5ZL1
Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL26B1 |
| Synchrotron site | SPring-8 |
| Beamline | BL26B1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-05-13 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 1.0 |
| Spacegroup name | H 3 2 |
| Unit cell lengths | 270.217, 270.217, 128.909 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 40.000 - 3.200 |
| R-factor | 0.241 |
| Rwork | 0.240 |
| R-free | 0.25370 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1kbw |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.372 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.260 |
| High resolution limit [Å] | 3.200 | 8.670 | 3.200 |
| Rmerge | 0.124 | 0.040 | 0.569 |
| Rmeas | 0.130 | 0.042 | 0.596 |
| Rpim | 0.038 | 0.013 | 0.176 |
| Number of reflections | 29860 | 1565 | 1482 |
| <I/σ(I)> | 7.4 | ||
| Completeness [%] | 100.0 | 100 | 100 |
| Redundancy | 11.5 | 11 | 11.5 |
| CC(1/2) | 0.999 | 0.933 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 100mM Tris-HCl, 500mM lithium sulfate, 4% PEG 4000 (pH8.5) |






