5ZGU
Crystal structure of NDM-1 at pH7.0 (HEPES) with 2 molecules per asymmetric unit
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17U1 |
| Synchrotron site | SSRF |
| Beamline | BL17U1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-06-10 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97922 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 40.762, 73.496, 66.448 |
| Unit cell angles | 90.00, 98.13, 90.00 |
Refinement procedure
| Resolution | 50.000 - 1.550 |
| R-factor | 0.1199 |
| Rwork | 0.118 |
| R-free | 0.15790 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3Q6X |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.429 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.610 |
| High resolution limit [Å] | 1.550 | 3.340 | 1.550 |
| Rmerge | 0.069 | 0.038 | 0.441 |
| Number of reflections | 55127 | 5725 | 5344 |
| <I/σ(I)> | 8.2 | ||
| Completeness [%] | 97.5 | 99.5 | 95.7 |
| Redundancy | 3.7 | 3.8 | 3.6 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 295 | 0.1M HEPES pH7.0, 25% PEG 3350 |






