Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5ZGA

Crystal Structure of Triosephosphate isomerase SAD deletion and N115A mutant from Opisthorchis viverrini

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 11C
Synchrotron sitePAL/PLS
Beamline11C
Temperature [K]293
Detector technologyPIXEL
Collection date2016-09-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97942
Spacegroup nameP 1 21 1
Unit cell lengths74.040, 92.555, 76.075
Unit cell angles90.00, 109.39, 90.00
Refinement procedure
Resolution46.278 - 1.793
R-factor0.1474
Rwork0.147
R-free0.18100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5zfx
RMSD bond length0.009
RMSD bond angle1.104
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.830
High resolution limit [Å]1.8004.8801.800
Rmerge0.0910.0950.273
Rmeas0.1000.1050.310
Rpim0.0400.0430.143
Total number of observations464383
Number of reflections8796845064271
<I/σ(I)>9.6
Completeness [%]97.297.195.1
Redundancy5.35.84
CC(1/2)0.9940.850
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION8.5293PEG 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon