5ZFG
Crystal structure of a diazinon-metabolizing glutathione S-transferase in the silkworm, Bombyx mori
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-18 |
Detector | AGILENT TITAN CCD |
Wavelength(s) | 0.9 |
Spacegroup name | P 41 |
Unit cell lengths | 86.249, 86.249, 58.772 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.300 - 1.700 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.22100 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.832 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.300 | 1.700 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.049 | 1.000 |
Number of reflections | 48961 | |
<I/σ(I)> | 25.2 | |
Completeness [%] | 99.3 | |
Redundancy | 7.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1 M Tris-HCl pH 8.0 containing 0.6 M sodium acetate, 25% PEG 4000 |