5ZAI
Crystal structure of 3-Hydroxypropionyl-CoA dehydratase from Metallosphaera sedula
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-05-10 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.685, 130.170, 84.791 |
Unit cell angles | 90.00, 119.57, 90.00 |
Refinement procedure
Resolution | 25.830 - 1.800 |
R-factor | 0.1856 |
Rwork | 0.183 |
R-free | 0.22940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pzk |
RMSD bond length | 0.011 |
RMSD bond angle | 1.499 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.750 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.082 | 0.359 |
Rpim | 0.035 | 0.202 |
Number of reflections | 138405 | 12686 |
<I/σ(I)> | 30.4 | |
Completeness [%] | 98.4 | |
Redundancy | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | 10%(w/v) polyethylene glycol (PEG) 8000, 0.1M Sodium-potassium phosphate, pH 6.2, 0.2M Sodium Chloride, 10mM Ethylenediaminetetraacetic acid (EDTA) disodium salt dehydrate |