5Z8X
Crystal structure of human LRRTM2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 90.691, 240.959, 259.434 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.429 - 3.150 |
R-factor | 0.2042 |
Rwork | 0.203 |
R-free | 0.23090 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5a5c |
RMSD bond length | 0.011 |
RMSD bond angle | 1.147 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.200 |
High resolution limit [Å] | 3.150 | 3.150 |
Number of reflections | 48031 | |
<I/σ(I)> | 11.3 | |
Completeness [%] | 96.3 | 88.1 |
Redundancy | 6.4 | 3.2 |
CC(1/2) | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 18% PEG 3350, 0.1 M ammonium sulfate, 0.1 M sodium malonate |