5Z66
Structure of periplasmic trehalase from Diamondback moth gut bacteria complexed with validoxylamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97937 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 122.030, 51.450, 96.400 |
Unit cell angles | 90.00, 106.95, 90.00 |
Refinement procedure
Resolution | 30.497 - 1.800 |
R-factor | 0.1643 |
Rwork | 0.163 |
R-free | 0.19360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2jg0 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.729 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.500 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.099 | 0.628 |
Rmeas | 0.120 | 0.758 |
Rpim | 0.082 | 0.521 |
Number of reflections | 53185 | 3172 |
<I/σ(I)> | 9.4 | 1.9 |
Completeness [%] | 97.9 | 100 |
Redundancy | 3 | 3.1 |
CC(1/2) | 0.992 | 0.634 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 0.2 M Ammonium sulphate, 28% PEG 4000 |