5Z4G
Crystal structure of secretory abundant heat soluble protein 4 from Ramazzottius varieornatus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-08 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.90000 |
Spacegroup name | P 1 |
Unit cell lengths | 32.802, 41.926, 53.483 |
Unit cell angles | 89.97, 80.75, 78.76 |
Refinement procedure
Resolution | 50.010 - 1.500 |
R-factor | 0.16161 |
Rwork | 0.159 |
R-free | 0.20308 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xna |
RMSD bond length | 0.007 |
RMSD bond angle | 1.224 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.010 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.036 | 0.260 |
Rmeas | 0.051 | 0.368 |
Rpim | 0.036 | 0.260 |
Number of reflections | 42396 | 2099 |
<I/σ(I)> | 23.1 | 2.9 |
Completeness [%] | 95.9 | 95.5 |
Redundancy | 2 | 2 |
CC(1/2) | 0.818 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 293 | 50mM HEPES pH 7.8, 1mM ZnSO4, 24%(v/v) PEG600 |