5Z0Z
Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG - D242A mutant
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-05-15 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97625 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 48.113, 75.502, 402.241 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 201.120 - 2.470 |
| R-factor | 0.22686 |
| Rwork | 0.225 |
| R-free | 0.26166 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5yu5 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.170 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 201.120 | 2.873 |
| High resolution limit [Å] | 2.470 | 2.474 |
| Rmerge | 0.159 | |
| Rmeas | 0.169 | |
| Rpim | 0.056 | 0.561 |
| Number of reflections | 21504 | 1076 |
| <I/σ(I)> | 8.6 | 1.9 |
| Completeness [%] | 88.4 | 57.5 |
| Redundancy | 9.8 | 6.7 |
| CC(1/2) | 0.990 | 0.663 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M Magnesium acetate, 10% w/v PEG 8000 |
