5Z0R
Structural insight into the Zika virus capsid encapsulating the viral genome
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 74.301, 81.425, 77.190 |
Unit cell angles | 90.00, 104.79, 90.00 |
Refinement procedure
Resolution | 48.286 - 2.050 |
R-factor | 0.2221 |
Rwork | 0.221 |
R-free | 0.25370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ez9 1sfk |
RMSD bond length | 0.004 |
RMSD bond angle | 1.058 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Number of reflections | 55737 | |
<I/σ(I)> | 10.5 | |
Completeness [%] | 94.7 | |
Redundancy | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 8.5 | 293 | 10% v/v 2-Propanol, 0.1 M BICINE pH 8.5, 30% w/v Polyethylene glycol 1500 |