5YVM
Crystal Structure of the archaeal halo-thermophilic Red Sea brine pool alcohol dehydrogenase ADH/D1 bound to NZQ
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97856 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 57.190, 103.720, 128.510 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.092 - 2.120 |
R-factor | 0.174 |
Rwork | 0.172 |
R-free | 0.22250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bfj |
RMSD bond length | 0.010 |
RMSD bond angle | 1.048 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MoRDa |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.092 | 2.200 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.095 | 0.520 |
Rmeas | 0.068 | |
Number of reflections | 21120 | 2104 |
<I/σ(I)> | 11.96 | 2.27 |
Completeness [%] | 96.0 | 97 |
Redundancy | 3.6 | 3.7 |
CC(1/2) | 0.998 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 150mM Mg Acetate, 27% methyl-pentane-diol, 100mM Na cacodylate, pH 6.5 |