5YVC
Structure of CaMKK2 in complex with CKI-012
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-12 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.332, 77.831, 84.155 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.292 - 2.020 |
R-factor | 0.1721 |
Rwork | 0.170 |
R-free | 0.21110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zv2 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.851 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.050 |
High resolution limit [Å] | 2.020 | 2.020 |
Rmeas | 0.083 | 1.077 |
Rpim | 0.030 | 0.396 |
Number of reflections | 29341 | 1444 |
<I/σ(I)> | 24.9 | 2.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.4 | 7.3 |
CC(1/2) | 0.732 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.1M sodium cocodylate pH 6.0, 0.2M sodium acetate, 20% PEG 8000, 0.03M xylitol |