5YOJ
Structure of A17 HIV-1 Protease in Complex with Inhibitor KNI-1657
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-22 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 58.836, 85.828, 46.756 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.850 - 1.500 |
R-factor | 0.1716 |
Rwork | 0.171 |
R-free | 0.18810 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.007 |
RMSD bond angle | 1.280 |
Data reduction software | HKL-2000 |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.900 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.089 | 0.467 |
Number of reflections | 37951 | 3669 |
<I/σ(I)> | 27.5 | 2.5 |
Completeness [%] | 98.1 | 96.9 |
Redundancy | 4.9 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 126mM phosphate, 63mM sodium citrate buffer, 20% (w/v) PEG 4000 |