Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YOH

Mycobacterium Tuberculosis Methionine aminopeptidase type 1c (C105M mutant) in complex with Methionine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2016-05-25
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths49.332, 48.690, 56.151
Unit cell angles90.00, 95.30, 90.00
Refinement procedure
Resolution28.590 - 1.630
R-factor0.1683
Rwork0.166
R-free0.21800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yj3
RMSD bond length0.022
RMSD bond angle2.159
Data reduction softwareDENZO (2.3.1)
Data scaling softwareSCALEPACK (2.2.0)
Phasing softwareHKL-2000
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.5903.7001.680
High resolution limit [Å]1.6203.4901.620
Rmerge0.0270.0220.118
Rmeas0.0380.0310.166
Rpim0.0260.0220.117
Number of reflections323113114
<I/σ(I)>59.8
Completeness [%]92.297.278.1
Redundancy1.91.91.9
CC(1/2)0.9980.9970.961
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52980.1M Hepes, 27% Peg3350, 3% glycerol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon