Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YNH

Crystal structure of Pullulanase from Klebsiella pneumoniae complex at 10 mM gamma-cyclodextrin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyCCD
Collection date2016-09-17
DetectorRAYONIX MX225HE
Wavelength(s)1.0
Spacegroup nameP 43 21 2
Unit cell lengths89.206, 89.206, 298.980
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.670 - 2.050
R-factor0.2077
Rwork0.205
R-free0.25780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fgz
RMSD bond length0.007
RMSD bond angle0.899
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.123
High resolution limit [Å]2.0502.050
Rmerge0.0990.428
Number of reflections761497539
<I/σ(I)>19.044.7
Completeness [%]99.099.31
Redundancy7.17.2
CC(1/2)0.9970.936
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62930.2M magnesium sulfate, 20%(w/v) PEG3350

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon