5YND
Crystal structure of Pullulanase from Klebsiella pneumoniae complex at 1 mM gamma-cyclodextrin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-16 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 88.773, 88.773, 298.379 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.387 - 2.227 |
R-factor | 0.1933 |
Rwork | 0.191 |
R-free | 0.24250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fgz |
RMSD bond length | 0.008 |
RMSD bond angle | 0.865 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.307 |
High resolution limit [Å] | 2.227 | 2.227 |
Rmerge | 0.084 | 0.513 |
Number of reflections | 59330 | 5762 |
<I/σ(I)> | 16.86 | 3.77 |
Completeness [%] | 99.5 | 99.21 |
Redundancy | 5.7 | 5.8 |
CC(1/2) | 0.998 | 0.945 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.2M magnesium sulfate, 20%(w/v) PEG3350 |