5YN2
Crystal structure of apo Pullulanase from Klebsiella pneumoniae in space group P43212
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-03 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 89.038, 89.038, 301.843 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.799 - 2.301 |
R-factor | 0.1873 |
Rwork | 0.184 |
R-free | 0.24230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fgz |
RMSD bond length | 0.008 |
RMSD bond angle | 0.876 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.383 |
High resolution limit [Å] | 2.301 | 2.301 |
Rmerge | 0.071 | 0.537 |
Number of reflections | 54725 | 5298 |
<I/σ(I)> | 18.08 | 4.75 |
Completeness [%] | 99.3 | 98.22 |
Redundancy | 5 | 5.1 |
CC(1/2) | 0.998 | 0.867 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 0.2 M magnesium sulfate, 20% (w/v) PEG3350 |