5YJI
Co-crystal structure of Mouse Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-12-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 47.356, 71.622, 157.408 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.360 - 1.990 |
R-factor | 0.21157 |
Rwork | 0.210 |
R-free | 0.23825 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rod |
RMSD bond length | 0.008 |
RMSD bond angle | 1.153 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.360 | |
High resolution limit [Å] | 1.990 | 1.990 |
Rmerge | 0.520 | |
Rpim | 0.182 | |
Number of reflections | 37822 | |
<I/σ(I)> | 14.2 | |
Completeness [%] | 99.6 | |
Redundancy | 9.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.35M Sodium thiocynate, 20% PEG 3350, with 0.01M TMAO as additive |