5YD2
Crystal Structure of Delta 4 mutant of EhPSAT (Phosphoserine aminotransferase of Entamoeba histolytica)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 77.15 |
| Detector technology | IMAGE PLATE |
| Collection date | 2016-10-25 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 132.238, 67.904, 95.030 |
| Unit cell angles | 90.00, 110.93, 90.00 |
Refinement procedure
| Resolution | 50.000 - 2.350 |
| R-factor | 0.23196 |
| Rwork | 0.229 |
| R-free | 0.28695 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5yb0 |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.548 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | DM |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.390 |
| High resolution limit [Å] | 2.350 | 6.370 | 2.350 |
| Rmerge | 0.055 | 0.030 | 0.421 |
| Rmeas | 0.060 | 0.033 | 0.489 |
| Rpim | 0.023 | 0.013 | 0.243 |
| Number of reflections | 31390 | 1725 | 1125 |
| <I/σ(I)> | 20.6 | ||
| Completeness [%] | 95.0 | 99.9 | 68.5 |
| Redundancy | 6.1 | 6.6 | 3.2 |
| CC(1/2) | 0.999 | 0.928 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 20% PEG2000MME 100 mM Tris pH-8.5 200 mM TMAO |






