5YB8
L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-arginine complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 98.200, 133.000, 101.500 |
Unit cell angles | 90.00, 112.00, 90.00 |
Refinement procedure
Resolution | 94.110 - 2.300 |
R-factor | 0.2208 |
Rwork | 0.220 |
R-free | 0.27290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3we0 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.726 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 94.110 | 94.110 | 2.420 |
High resolution limit [Å] | 2.300 | 15.000 | 2.300 |
Rmerge | 0.081 | 0.040 | 0.472 |
Rmeas | 0.094 | 0.047 | 0.550 |
Total number of observations | 404779 | ||
Number of reflections | 106954 | 374 | 15105 |
<I/σ(I)> | 11.98 | 28.14 | 3.24 |
Completeness [%] | 99.7 | 89.9 | 99.8 |
Redundancy | 3.785 | 3.316 | 3.805 |
CC(1/2) | 0.997 | 0.998 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 20% PEG 3350, 0.15M DL-Malic acid |