5YB7
L-Amino acid oxidase/monooxygenase from Pseudomonas sp. AIU 813 - L-ornithine complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 94.600, 132.900, 101.900 |
Unit cell angles | 90.00, 111.50, 90.00 |
Refinement procedure
Resolution | 94.810 - 2.000 |
R-factor | 0.1985 |
Rwork | 0.198 |
R-free | 0.23980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3we0 |
RMSD bond length | 0.017 |
RMSD bond angle | 1.769 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 94.810 | 94.810 | 2.150 |
High resolution limit [Å] | 2.000 | 15.000 | 2.000 |
Rmerge | 0.054 | 0.021 | 0.407 |
Rmeas | 0.063 | 0.025 | 0.474 |
Number of reflections | 156339 | 345 | 30060 |
<I/σ(I)> | 16.01 | 45.36 | 3.7 |
Completeness [%] | 98.9 | 84.8 | 98 |
Redundancy | 3.779 | 3.388 | 3.746 |
CC(1/2) | 0.999 | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 20% PEG 3350, 0.15 M DL-Malic acid |