5YAZ
Crystal structure of the ANKRD domain of KANK1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 29.102, 70.207, 60.655 |
Unit cell angles | 90.00, 96.91, 90.00 |
Refinement procedure
Resolution | 30.107 - 1.900 |
R-factor | 0.1956 |
Rwork | 0.193 |
R-free | 0.23460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yay |
RMSD bond length | 0.014 |
RMSD bond angle | 1.409 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.077 | 0.033 | 1.199 |
Rmeas | 0.090 | 0.039 | 1.413 |
Rpim | 0.047 | 0.020 | 0.741 |
Number of reflections | 19134 | 988 | 949 |
<I/σ(I)> | 10.3 | ||
Completeness [%] | 99.8 | 98.3 | 99.9 |
Redundancy | 3.7 | 3.7 | 3.5 |
CC(1/2) | 0.998 | 0.545 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 289 | 0.1 M calcium acetate, 0.1 M Sodium acetate, 10% w/v polyethylene glycol 4000 |