Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5YAN

Deconstructing the Salt-Bridge Network of a Computationally Designed Collagen Heterotrimer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2016-08-25
DetectorADSC QUANTUM 315r
Wavelength(s)0.9798
Spacegroup nameP 21 21 21
Unit cell lengths27.597, 51.391, 128.522
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.720 - 1.770
R-factor0.24
Rwork0.238
R-free0.28800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.110
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 Overall
Low resolution limit [Å]47.720
High resolution limit [Å]1.770
Number of reflections18597
<I/σ(I)>20.1
Completeness [%]98.1
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27760% v/v (+/-)-2-methyl-2,4-pentanediol, 40m M sodium cacodylat-etrihydrate at pH 7.0, 80 mM Potassium chloride and 12 mM Sperminetetrahydrochloride.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon