5Y9R
Crystal structure of the oligomerization domain of NSP4 from rotavirus strain MF66
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM14 |
| Synchrotron site | ESRF |
| Beamline | BM14 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-04-29 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.9537 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.120, 57.430, 62.600 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.595 - 2.200 |
| R-factor | 0.2036 |
| Rwork | 0.202 |
| R-free | 0.23840 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.770 |
| Data reduction software | iMOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 62.600 | 2.270 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.063 | 0.410 |
| Rmeas | 0.079 | 0.520 |
| Rpim | 0.047 | 0.310 |
| Number of reflections | 9675 | 821 |
| <I/σ(I)> | 12.8 | 3.5 |
| Completeness [%] | 98.8 | 99.3 |
| Redundancy | 4.9 | 4.9 |
| CC(1/2) | 0.997 | 0.875 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 4.5 | 299 | 0.1M sodium acetate trihydrate, 24% PEG 2000, 10mM magnesium chloride, 10mM nickel chloride, 10mM cadmium chloride |






