Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Y89

Periplasmic heme-binding protein BhuT in complex with one heme (holo-1)

Replaces:  5GJ0
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyCCD
Collection date2012-07-12
DetectorRAYONIX MX-225
Wavelength(s)1.00
Spacegroup nameP 61 2 2
Unit cell lengths199.166, 199.166, 117.736
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.400
R-factor0.2014
Rwork0.200
R-free0.22010
Structure solution methodSAD
RMSD bond length0.021
RMSD bond angle1.806
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareSHELXCD
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.4005.1702.400
Rmerge0.1010.0300.860
Total number of observations1184361
Number of reflections5370857465286
<I/σ(I)>7.3
Completeness [%]99.699.999.4
Redundancy22.121.121
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.82772.0M Ammonium Sulfate, 0.1M Sodium Acetate
1VAPOR DIFFUSION, SITTING DROP4.82772.0M Ammonium Sulfate, 0.1M Sodium Acetate

231029

PDB entries from 2025-02-05

PDB statisticsPDBj update infoContact PDBjnumon