Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5Y5I

Time-resolved SFX structure of cytochrome P450nor: 20 ms after photo-irradiation of caged NO in the presence of NADH (NO-bound state), light data

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSACLA BEAMLINE BL3
Synchrotron siteSACLA
BeamlineBL3
Temperature [K]298
Detector technologyCCD
Collection date2016-07-06
DetectorMPCCD
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths54.600, 102.300, 73.700
Unit cell angles90.00, 92.60, 90.00
Refinement procedure
Resolution41.045 - 2.100
R-factor0.15
Rwork0.148
R-free0.19580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1cl6
RMSD bond length0.007
RMSD bond angle0.884
Data reduction softwareCrystFEL
Data scaling softwareCrystFEL
Phasing softwareMOLREP
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.0002.020
High resolution limit [Å]2.0002.000
Number of reflections54628
<I/σ(I)>61.5
Completeness [%]100.0100
Redundancy119.482.2
CC(1/2)0.9810.543
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE8.529334-38% PEG 10000, 0.1 M BIS-TRIS PROPANE 0.15 M Ammonium acetate

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon