5Y4M
Discoidin domain of human CASPR2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.250, 59.680, 62.599 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.195 - 1.310 |
R-factor | 0.1379 |
Rwork | 0.137 |
R-free | 0.16580 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.858 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.330 |
High resolution limit [Å] | 1.310 | 1.310 |
Rmerge | 0.078 | 0.538 |
Rmeas | 0.083 | 0.586 |
Rpim | 0.028 | 0.227 |
Number of reflections | 33381 | 1598 |
<I/σ(I)> | 35.36 | 2.75 |
Completeness [%] | 99.6 | 97.3 |
Redundancy | 8.5 | 6.1 |
CC(1/2) | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 296 | 20% PEG8000,100 mM Na2HPO4/KH2PO4, pH 6.2, 200 mM NaCl |