5Y0P
Crystal structure of Bacillus subtilis TmcAL bound with alpha-thio ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2014-12-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.995, 67.999, 211.168 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.906 - 2.300 |
R-factor | 0.2013 |
Rwork | 0.200 |
R-free | 0.22540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y0n |
RMSD bond length | 0.007 |
RMSD bond angle | 1.252 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.230 | 2.300 |
Rmerge | 0.076 | 0.027 | 1.884 |
Rpim | 0.022 | 0.008 | 0.548 |
Number of reflections | 44459 | 2426 | 2137 |
<I/σ(I)> | 20.46 | 69.3 | 1.3 |
Completeness [%] | 99.8 | 99.96 | 95.87 |
Redundancy | 12.83 | 11.39 | 12.42 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Tris-HCl, PEG400, KCl, MgCl2 |