5XXN
Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-02 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 81.977, 167.909, 225.061 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.740 - 2.050 |
R-factor | 0.1805 |
Rwork | 0.178 |
R-free | 0.21944 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xxl |
RMSD bond length | 0.010 |
RMSD bond angle | 1.458 |
Data reduction software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0123) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.090 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.159 | |
Number of reflections | 94130 | |
<I/σ(I)> | 11.7 | |
Completeness [%] | 96.4 | |
Redundancy | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | PEG 3350 Sodium acetate |