5XW4
Crystal structure of budding yeast Cdc14p (wild type) in the apo state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2009-11-24 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.98 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.850, 95.130, 137.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.791 - 1.850 |
R-factor | 0.1792 |
Rwork | 0.178 |
R-free | 0.20270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ohe |
RMSD bond length | 0.004 |
RMSD bond angle | 0.665 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 55.791 | 55.790 | 1.880 |
High resolution limit [Å] | 1.850 | 10.130 | 1.850 |
Rmerge | 0.063 | 0.036 | 0.616 |
Rmeas | 0.069 | 0.039 | 0.706 |
Rpim | 0.026 | 0.016 | 0.337 |
Number of reflections | 91638 | ||
<I/σ(I)> | 16.5 | ||
Completeness [%] | 98.1 | 98.5 | 82.2 |
Redundancy | 6.7 | 5.7 | 4.2 |
CC(1/2) | 0.999 | 0.998 | 0.744 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | Bis-Tris, ammonium sulfate, PEG4000 |