5XV3
Crystal structure of ATG101-ATG13HORMA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-15 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 86.775, 101.116, 125.260 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.593 - 2.570 |
R-factor | 0.2348 |
Rwork | 0.232 |
R-free | 0.28260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xuy |
RMSD bond length | 0.004 |
RMSD bond angle | 0.766 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.610 |
High resolution limit [Å] | 2.570 | 6.970 | 2.570 |
Rmerge | 0.092 | 0.031 | 0.889 |
Rmeas | 0.098 | 0.034 | 0.948 |
Rpim | 0.034 | 0.012 | 0.327 |
Total number of observations | 299829 | ||
Number of reflections | 36347 | ||
<I/σ(I)> | 7.5 | ||
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 8.2 | 7.6 | 8.2 |
CC(1/2) | 0.999 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M HEPES (pH7.5), 0.2M MgCl2, 6-8% (w/v) PEG 3350 |